COPYING
ChangeLog
INSTALL.rst
MANIFEST.in
README.rst
setup.py
setup_w_cython.py
MACS2/Constants.py
MACS2/OptValidator.py
MACS2/OutputWriter.py
MACS2/PeakDetect.c
MACS2/PeakDetect.pyx
MACS2/PeakModel.c
MACS2/PeakModel.pyx
MACS2/Pileup.c
MACS2/Pileup.pyx
MACS2/Poisson.c
MACS2/PosVal.pyx
MACS2/Prob.c
MACS2/Prob.pyx
MACS2/Signal.c
MACS2/Signal.pyx
MACS2/Statistics.c
MACS2/Statistics.pyx
MACS2/__init__.py
MACS2/bdgbroadcall_cmd.py
MACS2/bdgcmp_cmd.py
MACS2/bdgdiff_cmd.py
MACS2/bdgopt_cmd.py
MACS2/bdgpeakcall_cmd.py
MACS2/cPosValCalculation.c
MACS2/cPosValCalculation.h
MACS2/cPosValCalculation.pxd
MACS2/cStatistics.c
MACS2/cStatistics.h
MACS2/callpeak_cmd.py
MACS2/cmbreps_cmd.py
MACS2/diffpeak_cmd.py
MACS2/filterdup_cmd.py
MACS2/hashtable.c
MACS2/hashtable.pyx
MACS2/khash.h
MACS2/khash.pxd
MACS2/pileup_cmd.py
MACS2/predictd_cmd.py
MACS2/randsample_cmd.py
MACS2/refinepeak_cmd.py
MACS2.egg-info/PKG-INFO
MACS2.egg-info/SOURCES.txt
MACS2.egg-info/dependency_links.txt
MACS2.egg-info/requires.txt
MACS2.egg-info/top_level.txt
MACS2/IO/BedGraph.c
MACS2/IO/BedGraph.pyx
MACS2/IO/BedGraphIO.c
MACS2/IO/BedGraphIO.pyx
MACS2/IO/BinKeeper.py
MACS2/IO/CallPeakUnit.c
MACS2/IO/CallPeakUnit.pyx
MACS2/IO/FixWidthTrack.c
MACS2/IO/FixWidthTrack.pyx
MACS2/IO/PairedEndTrack.c
MACS2/IO/PairedEndTrack.pyx
MACS2/IO/Parser.c
MACS2/IO/Parser.h
MACS2/IO/Parser.pyx
MACS2/IO/PeakIO.c
MACS2/IO/PeakIO.pyx
MACS2/IO/ScoreTrack.c
MACS2/IO/ScoreTrack.pyx
MACS2/IO/__init__.py
MACS2/IO/test_processing.py
MACS2/IO/test_threading.py
MACS2/data/__init__.py
MACS2/data/g0.01.dat
MACS2/data/g0.05.dat
bin/macs2