BLIMPS (BLocks IMProved Searcher)   Version 3.8  2006/04
(C) Copyright 1993-2000, Fred Hutchinson Cancer Research Center



Block File: exampleE.blk

Target File (s) : example.pros

Records Searched:   89

Scores Done:                      89

Alignments Done:               61972

AC#                    Description                                                Score RF  AA# Length
TC1A_CAEBR|P35072     TRANSPOSABLE ELEMENT TCB1 TRANSPOSASE (TRANSPOSABLE ELEM      2351  0   236    273 LEAAWKSIPMTVVQTLLESMPRRCKAVIDAKGYPTKY
TC2A_CAEBR|Q04202     TRANSPOSABLE ELEMENT TCB2 TRANSPOSASE                         2348  0   236    273 LQDVWQAIPMSVIDTILDSMPRRCQTVIDAKGFPTKY
TC1A_CAEEL|P03934     TRANSPOSABLE ELEMENT TC1 TRANSPOSASE                          2338  0   236    273 LENAWKAIPMSVIHKLIDSMPRRCQAVIDANGYATKY
TC3A_CAEEL|P34257     TRANSPOSABLE ELEMENT TC3 TRANSPOSASE                          2210  0   292    329 ILDAWKSIPDNQLKSLVRSMEDRLIEIIRTQGNPINY
DPOM_CLAPU|P22373     PROBABLE DNA POLYMERASE (EC 2.7.7.7) | PS00116                1558  0   932   1063 hQtEigKLkLEHTiTqgyFIaDktyAIvnTeGeiIKr
ACVS_EMENI|P27742     DELTA-(L-ALPHA-AMINOADIPYL)-L-CYSTEINYL-D-VALINE SYNTHET      1557  0  2964   3770 LAhMkSKLPaymVpKyLcrlEgGLpvtIngKlDVrKl
HOFB_HAEIN|P44622     PROTEIN TRANSPORT PROTEIN HOFB HOMOLOG | PS00662              1548  0   275    464 tAlqWlntPDKHImTaeDpIEieLdgIIQsQiNPqig
SPCB_DROME|Q00963     SPECTRIN BETA CHAIN | PS00019 | PS00020 | PS50003             1546  0  1863   2291 IQEEsAKLqDayAgDkakeItNReQEVLhAwdNlqam
GLGA_METJA|Q59001     PROBABLE GLYCOGEN SYNTHASE (EC 2.4.1.21) (STARCH [BACTER      1539  0    92    521 nLNVWDpIkyEifaDLVitylDeVKdIdvvsGhdwmc
YP22_YEAST|Q08968     HYPOTHETICAL 78.3 KD PROTEIN IN SSM1-GRE1 INTERGENIC REG      1536  0   403    688 LElllKgelnSVdDaLektMieRVQklvelsaNeyKY
MA2X_HUMAN|P49641     ALPHA-MANNOSIDASE IIX (EC 3.2.1.114) (MANNOSYL-OLIGOSACC      1526  0   179   1139 wikTfDKyytEQTQhILnSMvskLQEDpRrrflwAev
NIFK_AZOVI|P07329     NITROGENASE MOLYBDENUM-IRON PROTEIN BETA CHAIN (EC 1.18.      1523  0   377    522 LvkflleLgcEPVHiLchngNKRwKkavDAilaAspY
Y08F_MYCTU|Q11052     PROBABLE REGULATORY PROTEIN CY50.15 | PS50006                 1519  0    55    388 ItAlWeewPPSgARasIhSyvsnLrklLggaGidprv
CRTI_RHOCA|P17054     PHYTOENE DEHYDROGENASE (EC 1.3.-.-) (PHYTOENE DESATURASE      1514  0   345    524 VQDIfiKgeLaedmSLyvhrPsvtdptaApKGDdTfY
TRFE_RABIT|P19134     SEROTRANSFERRIN PRECURSOR (SIDEROPHILIN) (BETA-1-METAL B      1511  0   626    694 VADcsSKfcMfHsKTkdllfrDdtKClvDlrGknTye
ITA2_BOVIN|P53710     PLATELET MEMBRANE GLYCOPROTEIN IA PRECURSOR (G (FRAGMENT      1507  0   642   1170 dvsVdASfTPKkItlLnknaEikLKlcfsAKfrPTNq
TYRA_HAEIN|P43902     CHORISMATE MUTASE (EC 5.4.99.5) (CM) / PREPHENATE DEHYDR      1504  0    60    377 LEAEkAgISadlIeDvLRrfmResyAnenqfGFkTin
YCF2_MARPO|P09975     HYPOTHETICAL 259 KD PROTEIN (ORF 2136)                        1504  0   458   2136 ILffkQKnSkSFnKNLVkknsKdVITnvfsKeNkIei
LEF4_NPVAC|P41477     LATE EXPRESSION FACTOR 4                                      1502  0   327    464 gvNAsyAIdPvTAiecInyMNNnVQsVtlTdtcPAie
PPS2_BACSU|P39846     PEPTIDE SYNTHETASE 2 | PS00012 | PS00455 | PS50075            1502  0   750   2560 LANEygptenSVAtTILRhlNKkeritIghpirnTKv
TRA0_SHISO|P16944     TRANSPOSASE FOR INSERTION SEQUENCE ELEMENT IS640              1500  0   260    315 IADVaDKreLrQfKetpEqrsRwsrnIcsvtGYrlrY
GLND_MYCTU|Q10961     PROBABLE [PROTEIN-PII] URIDYLYLTRANSFERASE (EC 2.7.7.59)      1498  0   545    808 skATgpgvwsdwkaSLVDdlvRRCrmVMAgeslPqae
RPOD_ORYSA|P12093     DNA-DIRECTED RNA POLYMERASE BETA" CHAIN (EC 2.7.7.6)          1498  0   888   1513 VyvqWKKIlkSkeKyfVlvrPavayEmnegrnlATlF
MAOX_MESCR|P37223     MALATE OXIDOREDUCTASE (EC 1.1.1.40) (MALIC ENZYME) (ME)       1496  0   396    585 LiDAvQAIkPTVLigtsgkgkqftKEVveAmaNinak
GYRB_ACICA|Q43947     DNA GYRASE SUBUNIT B (EC 5.99.1.3) (FRAGMENTS) | PS00177      1490  0   138    216 LsElylvegDSaggSakqgrNRkmQAILplKGkilNv
GYRB_ACIJO|Q44081     DNA GYRASE SUBUNIT B (EC 5.99.1.3) (FRAGMENTS) | PS00177      1490  0   138    216 LsElylvegDSaggSakqgrNRkmQAILplKGkilNv
GYRB_ACIS1|Q44272     DNA GYRASE SUBUNIT B (EC 5.99.1.3) (FRAGMENTS) | PS00177      1490  0   138    216 LsElylvegDSaggSakqgrNRkmQAILplKGkilNv
GYRB_ACIS6|Q44277     DNA GYRASE SUBUNIT B (EC 5.99.1.3) (FRAGMENTS) | PS00177      1490  0   138    216 LsElylvegDSaggSakqgrNRkmQAILplKGkilNv
GYRB_ACIS9|Q44276     DNA GYRASE SUBUNIT B (EC 5.99.1.3) (FRAGMENTS) | PS00177      1490  0   138    216 LsElylvegDSaggSakqgrNRkmQAILplKGkilNv
SN2L_CAEEL|P41877     POSSIBLE GLOBAL TRANSCRIPTION ACTIVATOR SNF2L                 1490  0   906    971 LksrtAmelQrrCnTLItlIERemgEVvesKpvivta
PH81_YEAST|P17442     PHOSPHATE SYSTEM POSITIVE REGULATORY PROTEIN PHO81 (CDK       1486  0   960   1178 tLkqylSsrvvPLRSLLEvIPgsaQlVIRvyfptdKe
GYRB_ACIS8|Q44275     DNA GYRASE SUBUNIT B (EC 5.99.1.3) (FRAGMENTS) | PS00177      1485  0   138    216 LsElflvegDSaggSakqgrNRkmQAILplKGkilNv
MAOX_VITVI|P51615     MALATE OXIDOREDUCTASE (EC 1.1.1.40) (MALIC ENZYME) (ME)       1479  0   402    591 LLDAvKvIkPTVLigssgvgkaftKEVIeAmascnek
MAOX_POPTR|P34105     MALATE OXIDOREDUCTASE (EC 1.1.1.40) (MALIC ENZYME) (ME)       1478  0   169    591 VLDVlKnwPQKsIQvIVvtdgeRilglgDlgcqgIgi
RL17_SCHPO|O59794     60S RIBOSOMAL PROTEIN L17 | PS00464                           1478  0   102    187 eAkglDmdkLiikHvqVnaaPKqrrrtyRAhGrVTaY
YPB4_CAEEL|Q11107     HYPOTHETICAL ZINC FINGER PROTEIN B03B8.4 IN CHROMOSOME I      1478  0  1079   2111 pLAnrvhIqrSHAlTLrRFqcayCIkVfvsvGeyyeh
RPOC_TREPA|O83270     DNA-DIRECTED RNA POLYMERASE BETA' CHAIN (EC 2.7.7.6) (TR      1477  0   659   1416 VvEVWSKtSeElTslmmEtlERdkdgfntiymmATsg
ITA2_HUMAN|P17301     PLATELET MEMBRANE GLYCOPROTEIN IA PRECURSOR (GPIA) (COLL      1474  0   653   1181 dvAIeASfTPEkItlvnknaqiiLKlcfsAKfrPTKq
PARF_PARTE|P47244     PARAFUSIN | PS00710                                           1471  0   341    582 IAAnanlIfkNgLlgaaRSMPtsgalDkvAakNgIKl
MSH5_YEAST|Q12175     MUTS PROTEIN HOMOLOG 5 | PS00486                              1470  0   529    901 ygDIygAISDfeIeiLfSlqEqiLrrktQltaYnIll
RFAB_ECOLI|P27127     LIPOPOLYSACCHARIDE 1,6-GALACTOSYLTRANSFERASE (EC 2.4.1.-      1470  0   333    369 IhiEheKIPaSidefyqSkyyDRLhkVIisaisrrK
YDIL_ECOLI|P76196     HYPOTHETICAL 15.0 KD PROTEIN IN LPP-AROD INTERGENIC REGI      1470  0    32    127 IAqTgDSeSwrQweNgkcaIPDRVvEqLlAmrqqrKk
MAOM_SOLTU|P37221     MALATE OXIDOREDUCTASE [NAD], MITOCHONDRIAL 62 KD ISOFORM      1469  0    73    626 IrgllppnvMSFeQqIaRFMaDlkrlevQArdGPsdp
OE66_NPVOP|O10305     OCCLUSION-DERIVED VIRUS ENVELOPE PROTEIN E66 (ODV-E66)        1469  0   370    682 yEAdptnnTQaPLwTmtRrIwNRrarVInyNaNtvmF
MAOC_LYCES|P37222     MALATE OXIDOREDUCTASE, CHLOROPLAST (EC 1.1.1.4 (FRAGMENT      1463  0   385    573 LvNAvKSIkPTVLigssgagrtftKEVvQAmatfnek
MAOX_PHAVU|P12628     MALATE OXIDOREDUCTASE (EC 1.1.1.40) (MALIC ENZYME) (ME)       1462  0   400    589 LLEAvKAIkPTVLigssgagktftKEVveTmaslnek
DHA6_YEAST|P54115     ALDEHYDE DEHYDROGENASE, CYTOSOLIC (EC 1.2.1.3) | PS00070      1461  0   379    501 VgDkgyfIrPTVfyDvnEdMrivkeEIfgpvvtVAKF
PTP1_DROME|P35992     PROTEIN-TYROSINE PHOSPHATASE 10D PRECURSOR (EC 3.1.3.48)      1460  0   748   1630 IQtTsygIlsgiTslypRtMPliqsdVvvANGekede
KINN_HUMAN|Q12840     NEURONAL KINESIN HEAVY CHAIN (NKHC) | PS00411 | PS50067       1459  0   581   1032 eEfTvArLyiSkIKSeVkSvvKRCrqlenlQvechrk
KINN_MOUSE|P28738     NEURONAL KINESIN HEAVY CHAIN (NKHC) | PS00411 | PS50067       1459  0   581   1027 eEfTvArLyiSkIKSeVkSvvKRCrqlenlQvechrk
MAOM_AMAHP|P37224     MALATE OXIDOREDUCTASE [NAD], MITOCHONDRIAL 65 KD ISOFORM      1459  0   418    623 LvEVvrqvkPdVLlgLsaygglfsKEVLeAlkDsTst
MAOC_FLAPR|P36444     MALATE OXIDOREDUCTASE, CHLOROPLAST PRECURSOR (EC 1.1.1.4      1454  0   458    647 fLDAvKAIkPTVLigssgagqtftKEVveAmssfnek
SIN3_YEAST|P22579     PAIRED AMPHIPATHIC HELIX PROTEIN                              1454  0  1134   1536 IfNlfAntniyiffrhwttIyeRLlEIkQmNerVTKe
YFEH_ECOLI|P39836     HYPOTHETICAL 36.4 KD PROTEIN IN XAPB-LIG INTERGENIC REGI      1453  0   216    332 VngIWhKvgwgsLlfIVvvscvlLaiVIvvNvFmArr
YM8I_YEAST|Q03529     HYPOTHETICAL 44.9 KD PROTEIN IN URA10-NRC1 INTERGENIC RE      1453  0   200    384 VpvAWlpvvvyHmgvaLknMNqlfaCfLfcvGvfvwt
AST5_DROME|P10083     ACHAETE-SCUTE COMPLEX PROTEIN T5 (ACHAETE) | PS00038          1450  0    66    201 gpgAnKKLSkvsTlKmaveyiRRLQkVLheNdqqkQk
NUCL_MOUSE|P09405     NUCLEOLIN (PROTEIN C23) | PS00030                             1449  0   149    706 eEDEdDSdeDEddeeedEFePpiVKgVkpAKaaPAap
EUTE_ECOLI|P77445     ETHANOLAMINE UTILIZATION PROTEIN EUTE                         1447  0   261    467 sfDnniicaDEkVlivVDSvaDeLMrlMegQhaVklt
EUTE_SALTY|P41793     ETHANOLAMINE UTILIZATION PROTEIN EUTE                         1447  0   261    467 sfDnniicaDEkVlivVDSvaDeLMrlMegQhaVklt
YO96_CAEEL|P41846     HYPOTHETICAL 93.9 KD PROTEIN T20B12.6 IN CHROMOSOME III       1447  0   729    843 tnAVvlAkSadHIRrLqaekwDktQkIdeAKakieKl
CP4C_BLADI|P29981     CYTOCHROME P450 4C1 (EC 1.14.14.1) (CYPIVC1) | PS00086        1446  0   335    511 IQDkvyeelDhifQgsdRSttmRdlADMKylerVIKe
MAON_SOLTU|P37225     MALATE OXIDOREDUCTASE [NAD], MITOCHONDRIAL 59 KD ISOFORM      1444  0   398    601 LAEVvKKvkPhVLlgLsgvggifheEVLRAmkesdsv
NUCL_HUMAN|P19338     NUCLEOLIN (PROTEIN C23) | PS00030                             1439  0    55    706 aAtsaKKvvvSPTKKvavatPakkaAVtpgKkaAAtp
VIL1_MOUSE|Q62468     VILLIN                                                        1436  0   556    826 cgkgcSgderEmAKmvaDtIsRteKqVvvegqePANF
NOD1_RHIGA|P50331     NODULATION PROTEIN D I | PS00044                              1435  0    82    310 sviAWDpIkPaesDrrfRiIlsdfMTlIfmekvikri
NRAM_INBBE|P27907     NEURAMINIDASE (EC 3.2.1.18)                                   1435  0   352    465 hQrMaSKIgrwysRTmsktermGmelyvRydGDPwtd
NRAM_INBHK|P16191     NEURAMINIDASE (EC 3.2.1.18)                                   1432  0   353    466 hQrMaSKIgrwysRTmsktermGmelyvKydGDPwtd
NRAM_INBLN|P16193     NEURAMINIDASE (EC 3.2.1.18)                                   1432  0   352    465 hQrMaSKIgrwysRTmsktermGmelyvKydGDPwtd
NRAM_INBMF|P16199     NEURAMINIDASE (EC 3.2.1.18)                                   1432  0   352    465 hQrMaSKIgrwysRTmsktermGmelyvKydGDPwtd
NRAM_INBOR|P16201     NEURAMINIDASE (EC 3.2.1.18)                                   1432  0   353    466 hQrMaSKIgrwysRTmsktermGmelyvKydGDPwtd
NRAM_INBSI|P16203     NEURAMINIDASE (EC 3.2.1.18)                                   1432  0   353    466 hQrMaSKIgrwysRTmsktermGmelyvKydGDPwtd
NRAM_INBUS|P16205     NEURAMINIDASE (EC 3.2.1.18)                                   1432  0   353    466 hQrMaSKIgrwysRTmsktermGmelyvKydGDPwtd
NRAM_INBVI|P16207     NEURAMINIDASE (EC 3.2.1.18)                                   1432  0   352    465 hQrMaSKIgrwysRTmsktermGmelyvKydGDPwtd
NRAM_INBYB|Q90021     NEURAMINIDASE (EC 3.2.1.18)                                   1432  0   353    466 hQrMaSKIgrwysRTmsktermGmelyvKydGDPwtd
OE66_NPVAC|Q00704     OCCLUSION-DERIVED VIRUS ENVELOPE PROTEIN E66 (ODV-E66)        1429  0   393    704 yEsdptnniQaPLwTmaRrIwNRrgrIInyNaNtvsF
YDF7_SCHPO|Q10479     PUTATIVE GLUCOSYLTRANSFERASE C17C9.07 (EC 2.4.1.-)            1428  0   452    501 LfiyncfIhklVmgDkfEFlPlmLlstyAAwGifwsF
YOUG_BACLI|Q45292     HYPOTHETICAL 17.3 KD PROTEIN IN GNTR 5'REGION                 1423  0    55    147 kQNlkDdaPyqkftavgEvsdNRVykVhAgeGFspyr
GLO2_HUMAN|Q16775     HYDROXYACYLGLUTATHIONE HYDROLASE (EC 3.1.2.6) (GLYOXALAS      1420  0    81    260 IgAlthKIThlsTlqvgSlnvKcLaTpchTsGhicyF
YNC4_YEAST|P53970     HYPOTHETICAL 27.7 KD PROTEIN IN UME3-HDA1 INTERGENIC REG      1420  0   112    246 VtDIdKlIPLlkrnieLDevqyeVlArelwwGePlsa
HBB1_TRICR|P10785     HEMOGLOBIN BETA-1 CHAIN (MAJOR) | PS01033                     1417  0    50    145 eAiqhnpkvaSHgaKvmhSIaeaVKhldDlKaYyAdl
CYRG_MOUSE|P34902     CYTOKINE RECEPTOR COMMON GAMMA CHAIN PRECURSOR (GAMMA-C       1416  0   144    369 kLNlqnlviPrapeNLtlSnlsesQleLRwKsrHIKe
YBDM_ECOLI|P77174     HYPOTHETICAL 23.9 KD PROTEIN IN CSTA-DSBG INTERGENIC REG      1413  0   169    209 dnkIgKeLgMdsdevLrlkqiNGLQElfAdrqYsraw
GSHC_SCHMA|Q00277     GLUTATHIONE PEROXIDASE (EC 1.11.1.9) (GPX) | PS00460 | P      1412  0    52    169 LQEMhtrLvgKgLRiLafpcNqfggqepwAeaeikKF
PSRC_WOLSU|P31077     POLYSULFIDE REDUCTASE CHAIN C (SULPHUR REDUCTASE CHAIN C      1411  0   121    317 LcDEgpfgfLaPLaNIaySMaRpLeiVtfvlaigvga
YQHN_BACSU|P54512     HYPOTHETICAL 16.7 KD PROTEIN IN GCVT-SPOIIIAA INTERGENIC      1407  0     5    142 mEDyieqIyMlieeKgyarvsDiaeAlavhpssVTKm
YENR_YEREN|P54295     YENR REGULATORY PROTEIN | PS00622                             1406  0   134    244 sfDErieInkEkIQmLLiithekmlglyQsNsDknen
YFJJ_ECOLI|P52125     HYPOTHETICAL 24.6 KD PROTEIN IN ALPA-GABD INTERGENIC REG      1406  0    41    208 piDTenmdnPfFqprvdSgaisRftsaLKAKlkHdKh
TRA0_ECOLI|P15025     TRANSPOSASE FOR INSERTION SEQUENCE ELEMENT IS21               1390  0     3    390 rEDfymikqMrQqgayIvdIatqigCseRTvrrylKY
THIS_ECOLI|O32583     THIS PROTEIN                                                  1354  0     5     66 ndqAmQcaagqTVHeLLEqldqRqagaalAinqqIvp
