BLIMPS (BLocks IMProved Searcher)   Version 3.8  2006/04
(C) Copyright 1993-2000, Fred Hutchinson Cancer Research Center



Block File: exampleB.blk

Target File (s) : example.pros

Records Searched:   89

Scores Done:                      89

Alignments Done:               59658

AC#                    Description                                                Score RF  AA# Length
TC1A_CAEBR|P35072     TRANSPOSABLE ELEMENT TCB1 TRANSPOSASE (TRANSPOSABLE ELEM       815  0   121    273 GGGSVMVWGCF
TC1A_CAEEL|P03934     TRANSPOSABLE ELEMENT TC1 TRANSPOSASE                           815  0   121    273 GGGSVMVWGCF
TC2A_CAEBR|Q04202     TRANSPOSABLE ELEMENT TCB2 TRANSPOSASE                          815  0   121    273 GGGSVMVWGCF
TC3A_CAEEL|P34257     TRANSPOSABLE ELEMENT TC3 TRANSPOSASE                           764  0   175    329 GGGTVMVWGAF
GLND_MYCTU|Q10961     PROBABLE [PROTEIN-PII] URIDYLYLTRANSFERASE (EC 2.7.7.59)       540  0   750    808 GaGagiVWAkv
RPOC_TREPA|O83270     DNA-DIRECTED RNA POLYMERASE BETA' CHAIN (EC 2.7.7.6) (TR       537  0    50   1416 ifGTTkeWeCF
VIL1_MOUSE|Q62468     VILLIN                                                         535  0   289    826 GGlKIfVWkgk
ACVS_EMENI|P27742     DELTA-(L-ALPHA-AMINOADIPYL)-L-CYSTEINYL-D-VALINE SYNTHET       524  0   147   3770 GGGShtVaAsI
PTP1_DROME|P35992     PROTEIN-TYROSINE PHOSPHATASE 10D PRECURSOR (EC 3.1.3.48)       512  0  1362   1630 srAiVMltrCF
GLO2_HUMAN|Q16775     HYDROXYACYLGLUTATHIONE HYDROLASE (EC 3.1.2.6) (GLYOXALAS       510  0   131    260 tGdTlfVaGCg
MSH5_YEAST|Q12175     MUTS PROTEIN HOMOLOG 5 | PS00486                               510  0   613    901 iPnSTMidGgL
PH81_YEAST|P17442     PHOSPHATE SYSTEM POSITIVE REGULATORY PROTEIN PHO81 (CDK        510  0  1158   1178 GGySgiyyACe
YNC4_YEAST|P53970     HYPOTHETICAL 27.7 KD PROTEIN IN UME3-HDA1 INTERGENIC REG       509  0    86    246 GsGTglVglCv
MA2X_HUMAN|P49641     ALPHA-MANNOSIDASE IIX (EC 3.2.1.114) (MANNOSYL-OLIGOSACC       508  0   876   1139 GttSTrsWpCt
GLGA_METJA|Q59001     PROBABLE GLYCOGEN SYNTHASE (EC 2.4.1.21) (STARCH [BACTER       506  0   477    521 sPlSmMmknCy
MAOC_LYCES|P37222     MALATE OXIDOREDUCTASE, CHLOROPLAST (EC 1.1.1.4 (FRAGMENT       505  0   291    573 GtASVvlaGlM
YM8I_YEAST|Q03529     HYPOTHETICAL 44.9 KD PROTEIN IN URA10-NRC1 INTERGENIC RE       505  0   228    384 FcvgVfVWtlI
OE66_NPVAC|Q00704     OCCLUSION-DERIVED VIRUS ENVELOPE PROTEIN E66 (ODV-E66)         503  0   468    704 taGaIlVyAkF
HBB1_TRICR|P10785     HEMOGLOBIN BETA-1 CHAIN (MAJOR) | PS01033                      500  0    61    145 HGAKVMhsiAe
YPB4_CAEEL|Q11107     HYPOTHETICAL ZINC FINGER PROTEIN B03B8.4 IN CHROMOSOME I       498  0  1120   2111 GGGrVysctCs
PSRC_WOLSU|P31077     POLYSULFIDE REDUCTASE CHAIN C (SULPHUR REDUCTASE CHAIN C       497  0   253    317 GGlaslFWlgv
PPS2_BACSU|P39846     PEPTIDE SYNTHETASE 2 | PS00012 | PS00455 | PS50075             496  0  2110   2560 FnqSVMiyrAe
RFAB_ECOLI|P27127     LIPOPOLYSACCHARIDE 1,6-GALACTOSYLTRANSFERASE (EC 2.4.1.-       496  0    40    369 HiqSeMFffCr
SIN3_YEAST|P22579     PAIRED AMPHIPATHIC HELIX PROTEIN                               496  0   767   1536 sGrddMcWevL
YO96_CAEEL|P41846     HYPOTHETICAL 93.9 KD PROTEIN T20B12.6 IN CHROMOSOME III        496  0   586    843 GPASVpVqAsq
MAOC_FLAPR|P36444     MALATE OXIDOREDUCTASE, CHLOROPLAST PRECURSOR (EC 1.1.1.4       495  0   364    647 GtASVvlaGlI
MAOX_MESCR|P37223     MALATE OXIDOREDUCTASE (EC 1.1.1.40) (MALIC ENZYME) (ME)        495  0   302    585 GtASVvlaGlI
LEF4_NPVAC|P41477     LATE EXPRESSION FACTOR 4                                       493  0   260    464 GrGlfMrnfCI
MAOX_PHAVU|P12628     MALATE OXIDOREDUCTASE (EC 1.1.1.40) (MALIC ENZYME) (ME)        493  0   306    589 GtASVvlaGlL
KINN_HUMAN|Q12840     NEURONAL KINESIN HEAVY CHAIN (NKHC) | PS00411 | PS50067        491  0   294   1032 ncrTTMFicCs
GYRB_ACIJO|Q44081     DNA GYRASE SUBUNIT B (EC 5.99.1.3) (FRAGMENTS) | PS00177       489  0    55    216 tGtTVrFWpsa
GYRB_ACICA|Q43947     DNA GYRASE SUBUNIT B (EC 5.99.1.3) (FRAGMENTS) | PS00177       486  0    55    216 sGtTVrFWpse
GYRB_ACIS6|Q44277     DNA GYRASE SUBUNIT B (EC 5.99.1.3) (FRAGMENTS) | PS00177       486  0    55    216 sGtTVrFWpse
GYRB_ACIS9|Q44276     DNA GYRASE SUBUNIT B (EC 5.99.1.3) (FRAGMENTS) | PS00177       486  0    55    216 sGtTVrFWpse
YDF7_SCHPO|Q10479     PUTATIVE GLUCOSYLTRANSFERASE C17C9.07 (EC 2.4.1.-)             486  0   313    501 iPPaltFyiCL
DPOM_CLAPU|P22373     PROBABLE DNA POLYMERASE (EC 2.7.7.7) | PS00116                 485  0   647   1063 yGGrVeVfnpI
ITA2_BOVIN|P53710     PLATELET MEMBRANE GLYCOPROTEIN IA PRECURSOR (G (FRAGMENT       485  0   261   1170 GatKVMVvvtd
MAOX_VITVI|P51615     MALATE OXIDOREDUCTASE (EC 1.1.1.40) (MALIC ENZYME) (ME)        485  0   308    591 GtASVvlaGiv
OE66_NPVOP|O10305     OCCLUSION-DERIVED VIRUS ENVELOPE PROTEIN E66 (ODV-E66)         485  0   445    682 taGaIlVhArF
ITA2_HUMAN|P17301     PLATELET MEMBRANE GLYCOPROTEIN IA PRECURSOR (GPIA) (COLL       484  0   245   1181 GGdlTntfGAI
GYRB_ACIS8|Q44275     DNA GYRASE SUBUNIT B (EC 5.99.1.3) (FRAGMENTS) | PS00177       483  0    55    216 tGtKVrFWpsa
NIFK_AZOVI|P07329     NITROGENASE MOLYBDENUM-IRON PROTEIN BETA CHAIN (EC 1.18.       483  0   361    522 HGkrfalWGdp
RPOD_ORYSA|P12093     DNA-DIRECTED RNA POLYMERASE BETA" CHAIN (EC 2.7.7.6)           483  0  1090   1513 riPipkFWGlF
PARF_PARTE|P47244     PARAFUSIN | PS00710                                            482  0   386    582 FfGnlMdaGlI
YFEH_ECOLI|P39836     HYPOTHETICAL 36.4 KD PROTEIN IN XAPB-LIG INTERGENIC REGI       482  0   299    332 HqiqlMVcAvL
MAOX_POPTR|P34105     MALATE OXIDOREDUCTASE (EC 1.1.1.40) (MALIC ENZYME) (ME)        480  0    23    591 GGGvedVyGed
YCF2_MARPO|P09975     HYPOTHETICAL 259 KD PROTEIN (ORF 2136)                         480  0  1936   2136 FiGKrilWdpI
DHA6_YEAST|P54115     ALDEHYDE DEHYDROGENASE, CYTOSOLIC (EC 1.2.1.3) | PS00070       479  0   184    501 aPAlaMgnvCI
GYRB_ACIS1|Q44272     DNA GYRASE SUBUNIT B (EC 5.99.1.3) (FRAGMENTS) | PS00177       477  0     8    216 HGvgVsVvnAL
CRTI_RHOCA|P17054     PHYTOENE DEHYDROGENASE (EC 1.3.-.-) (PHYTOENE DESATURASE       473  0     6    524 GmGravViGAg
CP4C_BLADI|P29981     CYTOCHROME P450 4C1 (EC 1.14.14.1) (CYPIVC1) | PS00086         471  0    69    511 yGPlyriWAgp
KINN_MOUSE|P28738     NEURONAL KINESIN HEAVY CHAIN (NKHC) | PS00411 | PS50067        468  0   294   1027 ncrSrMFicCs
YP22_YEAST|Q08968     HYPOTHETICAL 78.3 KD PROTEIN IN SSM1-GRE1 INTERGENIC REG       466  0   317    688 nanTVahWqAy
EUTE_ECOLI|P77445     ETHANOLAMINE UTILIZATION PROTEIN EUTE                          463  0   214    467 tGGeavVeAAr
TRA0_ECOLI|P15025     TRANSPOSASE FOR INSERTION SEQUENCE ELEMENT IS21                463  0   193    390 nnGKVvFnsgF
TRA0_SHISO|P16944     TRANSPOSASE FOR INSERTION SEQUENCE ELEMENT IS640               463  0   193    315 nnGKVvFnsgF
MAOM_SOLTU|P37221     MALATE OXIDOREDUCTASE [NAD], MITOCHONDRIAL 62 KD ISOFORM       462  0   314    626 GtAgVaiaGlL
NOD1_RHIGA|P50331     NODULATION PROTEIN D I | PS00044                               459  0   203    310 mkPSVeqWllL
TRFE_RABIT|P19134     SEROTRANSFERRIN PRECURSOR (SIDEROPHILIN) (BETA-1-METAL B       459  0   274    694 dGkedliWelL
TYRA_HAEIN|P43902     CHORISMATE MUTASE (EC 5.4.99.5) (CM) / PREPHENATE DEHYDR       458  0   228    377 lleqIqiWGAk
NUCL_HUMAN|P19338     NUCLEOLIN (PROTEIN C23) | PS00030                              457  0   648    706 FGGrgggrGgF
NUCL_MOUSE|P09405     NUCLEOLIN (PROTEIN C23) | PS00030                              457  0   648    706 FGGrgggrGgF
SN2L_CAEEL|P41877     POSSIBLE GLOBAL TRANSCRIPTION ACTIVATOR SNF2L                  457  0   411    971 qGsrVlifsqF
NRAM_INBBE|P27907     NEURAMINIDASE (EC 3.2.1.18)                                    456  0    43    465 itApTMtldCa
NRAM_INBLN|P16193     NEURAMINIDASE (EC 3.2.1.18)                                    456  0    43    465 itApTMtldCa
NRAM_INBMF|P16199     NEURAMINIDASE (EC 3.2.1.18)                                    456  0    43    465 itApTMtldCa
NRAM_INBVI|P16207     NEURAMINIDASE (EC 3.2.1.18)                                    456  0    43    465 itApTMtldCt
SPCB_DROME|Q00963     SPECTRIN BETA CHAIN | PS00019 | PS00020 | PS50003              455  0   951   2291 HGvqTfyieCr
HOFB_HAEIN|P44622     PROTEIN TRANSPORT PROTEIN HOFB HOMOLOG | PS00662               454  0   267    464 sGkSIslytAL
MAON_SOLTU|P37225     MALATE OXIDOREDUCTASE [NAD], MITOCHONDRIAL 59 KD ISOFORM       452  0   297    601 GtAgValaGlL
NRAM_INBUS|P16205     NEURAMINIDASE (EC 3.2.1.18)                                    452  0    44    466 rtAqTMsldCa
YENR_YEREN|P54295     YENR REGULATORY PROTEIN | PS00622                              451  0   183    244 reneIlyWAsv
EUTE_SALTY|P41793     ETHANOLAMINE UTILIZATION PROTEIN EUTE                          450  0   214    467 tGGervVdAAr
AST5_DROME|P10083     ACHAETE-SCUTE COMPLEX PROTEIN T5 (ACHAETE) | PS00038           448  0    21    201 nGPSVirrnAr
NRAM_INBHK|P16191     NEURAMINIDASE (EC 3.2.1.18)                                    448  0   438    466 HsAaTaiyclM
NRAM_INBOR|P16201     NEURAMINIDASE (EC 3.2.1.18)                                    448  0    44    466 itApTMsldCa
NRAM_INBSI|P16203     NEURAMINIDASE (EC 3.2.1.18)                                    448  0   438    466 HsAaTaiyclM
NRAM_INBYB|Q90021     NEURAMINIDASE (EC 3.2.1.18)                                    448  0   438    466 HsAaTaiyclM
RL17_SCHPO|O59794     60S RIBOSOMAL PROTEIN L17 | PS00464                            446  0    75    187 FGvTqarWpvk
MAOM_AMAHP|P37224     MALATE OXIDOREDUCTASE [NAD], MITOCHONDRIAL 65 KD ISOFORM       443  0   198    623 GlGdlgVhGig
GSHC_SCHMA|Q00277     GLUTATHIONE PEROXIDASE (EC 1.11.1.9) (GPX) | PS00460 | P       440  0    62    169 kGlrIlafpCn
CYRG_MOUSE|P34902     CYTOKINE RECEPTOR COMMON GAMMA CHAIN PRECURSOR (GAMMA-C        430  0   302    369 yqGnfsaWsgv
Y08F_MYCTU|Q11052     PROBABLE REGULATORY PROTEIN CY50.15 | PS50006                  430  0   200    388 HPyreplWtqL
YDIL_ECOLI|P76196     HYPOTHETICAL 15.0 KD PROTEIN IN LPP-AROD INTERGENIC REGI       429  0   100    127 pdGnfidWkiy
YFJJ_ECOLI|P52125     HYPOTHETICAL 24.6 KD PROTEIN IN ALPA-GABD INTERGENIC REG       427  0   195    208 vGdgdrnfGCs
YQHN_BACSU|P54512     HYPOTHETICAL 16.7 KD PROTEIN IN GCVT-SPOIIIAA INTERGENIC       425  0    99    142 GiehhlsWnsI
THIS_ECOLI|O32583     THIS PROTEIN                                                   424  0    52     66 dGdqIllfqvI
YOUG_BACLI|Q45292     HYPOTHETICAL 17.3 KD PROTEIN IN GNTR 5'REGION                  418  0    27    147 GGfaqlchGke
YBDM_ECOLI|P77174     HYPOTHETICAL 23.9 KD PROTEIN IN CSTA-DSBG INTERGENIC REG       405  0    44    209 ePvdcvlWvkn
