LOCUS       Taf6                    2192 bp    mRNA    linear   ROD 14-FEB-2003
DEFINITION  Mus musculus TAF6 RNA polymerase II, TATA box binding protein
            (TBP)-associated factor (Taf6), mRNA.
ACCESSION   NM_009315
VERSION     NM_009315.1  GI:6678214
KEYWORDS    .
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Rodentia; Sciurognathi; Muridae; Murinae; Mus.
REFERENCE   1  (sites)
  AUTHORS   Umehara,T., Kida,S. and Horikoshi,M.
  TITLE     Isolation of a cDNA encoding a mouse TFIID subunit containing
            histone H4 homology
  JOURNAL   Gene 161 (2), 301-302 (1995)
  MEDLINE   95394377
PUBMED   7665100
REFERENCE   2  (bases 1 to 2192)
  AUTHORS   Horikoshi,M.
  JOURNAL   Unpublished
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from D49439.1.
FEATURES             Location/Qualifiers
     source          1..2192
                     /organism="Mus musculus"
                     /db_xref="taxon:10090"
                     /chromosome="5"
                     /cell_line="B8"
                     /cell_type="erythroleukemia"
     gene 1..2192
                     /gene="Taf6"
                     /note="synonyms: p80, 80kDa, AW549759"
                     /db_xref="LocusID:21343"
                     /db_xref="MGI:109129"
     CDS 11..2047
                     /gene="Taf6"
                     /note="TATA box binding protein (Tbp)-associated factor,
                     RNA polymerase II, E; TAF6 RNA polymerase II, TATA box
                     binding protein (TBP)-associated factor, 80 kDa"
                     /codon_start=1
                     /product="TAF6 RNA polymerase II, TATA box binding protein
                     (TBP)-associated factor"
                     /protein_id="NP_033341.1"
                     /db_xref="GI:6678215"
                     /db_xref="LocusID:21343"
                     /db_xref="MGI:109129"
                     /translation="MAEEKKLKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTDEVS
                     YRIKEIAQDALKFMHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGR
                     ELYFYEEKEVDLSDIINTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAE
                     ATEPLKSAKPGQEEDGPLKGKGQGAAAADGKGKEKKAPPLLEGAPFRLKPRSIHELSV
                     EQQLYYKEITEACVGSCEAKRAEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNL
                     ALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAA
                     RLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPWTTRYGSIAGLAELGHDVIKTLI
                     LPRLQQEGERIRSVLDGPVLSNIDRIGADHVQSLLLKHCAPVLAKLRPPPDNQDAYRG
                     EFGSLGPLLCSHVVKARAQAALQAQQVNRTTLTITQPRPTLTLSQAPQPGPRTPGLLK
                     VPGSIALPVQTLVSARAAAPPQPSPPPTKFIVMSSSSSASSTQQVLSLSTSAPGSGST
                     TTSPVTTTVPSVQPIVKLVSTATTAPPSTAPAGSGSVQKYIVVSLPPTGEGKGGPPSH
                     PSPVPPSSSSPSPLGGSTLCGGKQEAGDSPPPAPGTPKANGSQPTGPGSPQPAL"
     misc_feature 35..1234
                     /gene="Taf6"
                     /note="TAF6; Region: COG5095, TAF6, Transcription
                     initiation factor TFIID, subunit TAF6 (also component of
                     histone acetyltransferase SAGA) [Transcription]"
                     /db_xref="CDD:COG5095"
     misc_feature 38..238
                     /gene="Taf6"
                     /note="TAF; Region: TATA box binding protein associated
                     factor (TAF). TAF proteins adopt a histone-like fold"
                     /db_xref="CDD:pfam02969"
     polyA_signal 2175..2180
                     /gene="Taf6"
     polyA_site 2192
                     /gene="Taf6"
BASE COUNT      518 a    643 c    556 g    475 t
ORIGIN      
        1 gaattccagc atggccgagg agaagaaact gaaactcagc aatactgtgt tgccctctga
       61 gtccatgaag gtggtggcag aatctatggg cattgctcag attcaggagg agacttgcca
      121 gctactgaca gatgaggtca gctaccgcat caaggagatt gcccaggatg ccctgaagtt
      181 catgcacatg gggaaacgac agaagctcac taccagtgac attgactatg cattgaagtt
      241 aaagaatgtg gagccactgt atggcttcca tgctcaggag ttcatccctt tccggtttgc
      301 ctctggcggg ggccgggagc tgtacttcta tgaagagaag gaagtggacc tgagtgacat
      361 catcaacacc cctctgcctc gggtgcctct ggatgtctgc ctcaaagctc attggctaag
      421 catcgaaggc tgccagccag ctataccaga gaatccaccc ccagctccca aagagcagca
      481 gaaggctgag gccacagaac ccctgaaatc agcaaagcca ggccaagaag aagatggacc
      541 cctgaaaggc aaaggtcaag gggcagctgc agctgatggc aaaggaaaag agaagaaggc
      601 acctcccttg ctggaggggg cccctttccg cctgaagccc cgcagcatcc atgagctgtc
      661 tgtggagcag cagctgtatt acaaggagat cacggaagcc tgtgtgggat cctgtgaggc
      721 caagagagcg gaagctctgc agagcattgc cacggaccca gggctctatc agatgctacc
      781 acggttcagt accttcatct cagagggggt ccgtgtgaat gtagttcaga ataacctggc
      841 cttgctcatc tacctgatgc gtatggtgaa ggccctgatg gacaacccca cactgtatct
      901 agagaaatat gtgcatgagc tcattccagc agtaatgacc tgcattgtga gtagacagct
      961 gtgcttgcgg ccagatgtgg acaatcactg ggcactccgg gattttgctg cccgtctagt
     1021 ggcccaaatc tgtaagcatt tcagcacaac caccaacaac atccaatccc gaatcactaa
     1081 gacctttacc aagagctggg tcgacgagaa gactccatgg acaactcgat atggctccat
     1141 tgcaggccta gcagagctgg gacatgatgt gattaagacg ctaattctgc caaggctgca
     1201 gcaggaaggg gaacggatcc gcagtgtctt ggatgggcct gtgctgagca acatcgaccg
     1261 tattggagca gaccatgtgc agagccttct cctgaaacac tgtgccccag tactggccaa
     1321 gctgcgccct ccacctgaca atcaggatgc ctaccgggga gaatttgggt cccttgggcc
     1381 ccttctctgt tcccatgtgg tgaaggccag ggcccaggct gctctacaag ctcagcaggt
     1441 caacaggacc acactcacca tcacacagcc tcggcccaca ctgacccttt cacaggcccc
     1501 tcagccaggc cctcgcacgc ctggcttatt gaaggtccct ggctccattg ccttgcctgt
     1561 tcagacactg gtgtctgcga gagctgctgc tcctcctcag ccttctcctc ctccaaccaa
     1621 gtttattgta atgtcctcat cttccagtgc ctcatcaacc cagcaggttc tgtccctcag
     1681 cacctcagct cctggctcag gctctactac tacctctcct gtcaccacca cggttcccag
     1741 cgtgcagccc atcgtcaagc tggtctccac tgctaccact gcacccccaa gcacagcccc
     1801 tgctggttct ggcagtgttc agaaatacat tgtggtctct cttcccccaa caggggaagg
     1861 caaaggaggc cctccttctc atccttctcc agtcccccct tcatcttctt caccatcccc
     1921 acttggggga agtaccctct gtggggggaa gcaggaagct ggggacagcc cccctccagc
     1981 tccagggact ccaaaggcta atggctcgca gcctactgga cctggctctc cccagcctgc
     2041 tctgtgatgt gtcacatgtg ctgacctcct ctcttgtgca gattcctaca cactcaaaca
     2101 acctgtgagg gaggaaggag gaaaggtttt ccccagtgac tttcttttta gatattgtac
     2161 agtaagttcc tcagaataaa agttggattt gt
//
